Your USB experiments probably have nothing to do with why the server is not starting up (If I am understanding this right from
what you have typed)
1. Unplug the USB device (some times your machine may be trying to boot from the USB device) and then restart the system
2. if #1 does not work, grab hold of a rescue disk, boot from it and then start checking the root filesystem
Quote:
2 - reject and unmount device in OS and then take out external HDD
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You said that OS does not start. What do you mean by umount device in OS ?