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It seems that the CD-HOWTO says that SCSI CD-ROMs do not work with El Torito:
"The "El Torito" spec says that any cdrom drive should work (SCSI or EIDE) as long as the BIOS supports El Torito. So far this has only been tested with EIDE drives because none of the SCSI controllers that has been tested so far appears to support El Torito."
Another Win app is WinISO -- the free download version can work with ISO images up to 100MB.. anything beyond that requires a purchase. I haven't tried working with ISO's much in Linux yet.. other than mounting them in a directory and creating a plain(non-bootable) iso from a directory structure.
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