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Dont know why you can't see anything in the CDROM. Should be able to ls and see the files in there.
The lost+found is used for cleaning up file fragments. It's typical for it to be there and probably means you're running a journaled filesystem like ext3. Just ignore it.
You can just make directories there as usual, like...
mkdir /DISK1/whateveryouwant
and you are making your directory on the DISK1 hard drive.
Not sure man. I actually only use mine once. I use it to install the OS when the system boots and after that, I remove it from the system so I have another free IDE channel. From then on, I use an updater to keep the system current.
Maybe one of the other nice people here will give you some good input.
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