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Usually the scripts in /etc/init.d are wrapper scripts that start daemons or other scripts.
Look for /etc/init.d/skeleton. If it exists, you can base such a script on it.
And chkconfig --add XXX is not the same as chkconfig XXX on. Add adds the "service" into chkconfig, On tells it what to do at startup for each runlevel
They are not the same commands. Actually your first post the command does not have the correct syntax.
See man chkconfig for more information.
The initscript header does have a certain format. The format depends on the linux distribution/version you are running. Have you looked at the files already in the /etc/init.d directory?
Onther way around the problem, especially if you just want a one-off execution, is to run the script from rc.local or you can even run it from a user's cron with @reboot
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