What difference would you expect to see?
If you just want to set you default boot location, ust edit your
/etc/defaut/grub file to include
Code:
GRUB_DEFAULT="saved"
GRUB_SAVEDEFAULT=true
GRUB_TIMEOUT=10
and you will boot to the the last Ubuntu to which you booted after ten seconds (or when you press the enter key).
Remember to do a
sudo grub_mkconfig -o /boot/grub.cfg after you change to defaults to create a new
grub/cfg file.
See the
Wiki for details.
If you
really want to want each drive to be independent of each other, you can set the drive from which your system boots in your BIOS.