If you do it via the SlackBuild then they will be tracked by the package manager, so you can just say 'removepkg perl-date-calc' and it will do just that. If you manage it with the cpan command (and I recommend its shinier brother cpanp if you go this route) then you have to track them yourself.
If you want to delete a module, go with the SlackBuild route. Otherwise just use cpanp. Upgrading packages will be a bit easier, too.
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