@Guttorm's suggestions are right on and are in line with the DBA's (me) perspective. Without an idea of how the database is being used and the projected transaction count, it would be hard to tune MySQL's performance. When you say a 2GB Centos system, what do you mean? 2GB of RAM? If your application is of the LAMP variety and you need performance, having the temp area on a spindle might not be the first issue to address because there will be more to tune outside of running from a disk. Is your machine dedicated to running the database or does it also run the application?
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