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what I would like it to do is to exclude certain directories and include certain ones, now it seems to run ok kinda but it does not pull down any new files that I have added on the 192.168.1.1 server.
1. create an excludes.txt file and populate what you want and dont want with + -
2. root@192.168.1.1://home/jmoore/ is wrong, it should be: root@192.168.1.1:/home/jmoore
note the single / not double // this is not a URL you are connecting to for the ssh connection it is a file system pathway.
I do not fully understand how the rsync --include and --exclude filters work, but I can tell you I have had much difficulty with them. In your case, I would guess the --exclude is over-riding the --include switches. Try running it with the -vv switch, which will tell you what each filter is doing, that is, how it acts on each file or directory. That may tell you why it is not making the transfer you expect.
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