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Not unless you used a file system that supports this kind of thing: Such as Ext-3.
What you *can* do (other than copying the whole thing to a different drive and/or computer, which is easy if you have the drive/space) is to remember what you've customized from your original install. In my case, I usually only have to save /etc, /root /homes, /usr/local, and perhaps some things in /usr/src. Often there isn't much stuff there. You then can simply re-install your distribution (maybe it would be a good time to get the latest and greatest anyway) and then restore those directories.
1) Logical Volume Manager (LVM). I'm not sure if it will help or not.
2) If /homes has a lot of directories of stuff in it, you could probably move a few directories over to the other partition, then create a "soft link" to it where it used to be so nobody will tell much difference. This is a kludge, but it should work.
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