Take a look at /etc/DIR_COLORS
It defines what items in an ls come out what colour. As far as I can tell, you can't change what 'shade' of a colour a colour comes out at, but you can change, for instance wether a directory comes out in (dark) blue, or cyan.
If you're using an ssh client to view the colours you can usually change that within a setting on the client (in putty it's within the 'appearance' settings, and within ssh.com's ssh client it's a global.dat setting in a /<user>/preferences directory, or some suchlike.
Slick.
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