compile failed due to 'out of memory'

2007fld · 10-01-2010, 03:47 PM

Quote:

cc1: out of memory allocating 488 bytes after a total of 3328921600 bytes

linux-7huw:~/Download/pari-2.3.5 # uname -a
Linux linux-7huw 2.6.31.5-0.1-desktop #1 SMP PREEMPT 2009-10-26
15:49:03 +0100 x86_64 x86_64 x86_64 GNU/Linux

Maybe increase swap space will help? How to do it?
When I install suse 11 on this box, I remeber it shows the swap space is 2G, I didn't find it anywhere now...

Quote:

linux-7huw:~> df -l
Filesystem 1K-blocks Used Available Use% Mounted on
/dev/sda2 20641788 3296984 16296164 17% /
udev 1023124 208 1022916 1% /dev
/dev/sda4 38725340 240604 36517580 1% /home

linux-7huw:~> more /etc/fstab
/dev/disk/by-id/ata-Hitachi_HDS721680PLA380_PVFB04ZETVGVSE-part1 swap swap defaults 0 0
/dev/disk/by-id/ata-Hitachi_HDS721680PLA380_PVFB04ZETVGVSE-part2 / ext4 acl,user_xattr 1 1
/dev/disk/by-id/ata-Hitachi_HDS721680PLA380_PVFB04ZETVGVSE-part4 /home ext4 acl,user_xattr 1 2
proc /proc proc defaults 0 0
sysfs /sys sysfs noauto 0 0
debugfs /sys/kernel/debug debugfs noauto 0 0
usbfs /proc/bus/usb usbfs noauto 0 0
devpts /dev/pts devpts mode=0620,gid=5 0 0

neonsignal · 10-01-2010, 06:35 PM

How are you invoking gcc? What are you compiling? (notice that it has allocated over 3Gbytes of memory)

syg00 · 10-01-2010, 06:54 PM

Let's see "free -m" - it will show both RAM and swap.

2007fld · 10-01-2010, 10:14 PM

I'm trying to compile the gp/pari library on openSuse 11. configure works fine. 'make all' failed.

Quote:

linux-7huw:~/Download/pari-2.3.5 # ./Configure
Configuring pari-2.3.5 (STABLE)
Checking echo to see how to suppress newlines...
...using -n.
Looking for some tools first ...
...ld is /usr/bin/ld
...zcat is /usr/bin/zcat
...gzip is /usr/bin/gzip
...ranlib is /usr/bin/ranlib
...perl is /usr/bin/perl
...I could not find emacs.
Looking for the compilers ...
...cc is /usr/bin/cc
...gcc is /usr/bin/gcc
GNU compiler version 4.4.1 [gcc-4_4-branch revision 150839] (SUSE Linux)
Given the previous choices, sizeof(long) is 8 chars.
The internal word representation of a double is not needed (64bit).
==========================================================================
Building for architecture: amd64 running linux (x86-64 kernel) 64-bit version
==========================================================================
C compiler is /usr/bin/gcc -O3 -Wall -fno-strict-aliasing -fomit-frame-pointer -fPIC
Executable linker is /usr/bin/gcc -O3 -Wall -fno-strict-aliasing -fomit-frame-pointer -Wl,--export-dynamic
Dynamic Lib linker is /usr/bin/gcc -shared $(CFLAGS) $(DLCFLAGS) -Wl,-shared,-soname= $(LIBPARI_SONAME)
Looking in C lib for some symbols...
...Found exp2.
...Found log2.
...Found strftime.
...Found getrusage.
...Found sigaction.
...Found TIOCGWINSZ.
...Found getrlimit.
...Found stat.
...Found vsnprintf.
...I did not find dlopen.
Try again, with -ldl this time...
...Found dlopen.
Checking for optional libraries and headers...
###
### libX11.so not found. Please install X11 development files.
### They usually come in XFree86-devel (RPM) or xlibs-dev (Debian) packages
###
### X11 not found
### FLTK not found. Building without FLTK support
Hi-Res Graphics: none
###
### libreadline.so not found. Please install readline development files.
### They usually come in readline-devel (RPM) or libreadline-dev (Debian) packages
###
### Building without GNU readline support
Installation prefix ? [/usr/local]
...for architecture-independent files (share-prefix) ? [/usr/local/share]
Installation directories for:
...executables (gp, gphelp) ? [/usr/local/bin]
...libraries (libpari) ? [/usr/local/lib]
...include files ? [/usr/local/include]
...manual pages ? [/usr/local/share/man/man1]
...emacs macros ? [/usr/local/share/emacs/site-lisp/pari]
...other system-dependant data ? [/usr/local/lib/pari]
...other system-independant data ? [/usr/local/share/pari]
Default is dynamic executable and shared library
==========================================================================
Extracting examples/Makefile.linux-x86_64
Extracting Olinux-x86_64/Makefile
Extracting Makefile
Extracting Olinux-x86_64/paricfg.h
Extracting Olinux-x86_64/../Odos/paricfg.h
Extracting scripts and macros
...in doc
...in emacs
...in misc
==========================================================================
Shall we try to build pari 2.3.5 (released) now (y/n)? [n]
Ok. Type "make install" when you are ready
Bye !

Quote:

linux-7huw:~/Download/pari-2.3.5 # make all
make[1]: Entering directory `/root/Download/pari-2.3.5/doc'
rm -f develop.std
tex develop
make[1]: tex: Command not found
make[1]: *** [develop.dvi] Error 127
make[1]: Leaving directory `/root/Download/pari-2.3.5/doc'
make: [all] Error 2 (ignored)
make[1]: Entering directory `/root/Download/pari-2.3.5'
Making gp in Olinux-x86_64
make[2]: Entering directory `/root/Download/pari-2.3.5/Olinux-x86_64'
File ../src/funclist not changed.
../config/genkernel ../src/kernel/x86_64/asm0.h > parilvl0.h
cat ../src/kernel/none/tune.h ../src/kernel/none/int.h ../src/kernel/none/level1.h > parilvl1.h
cat parilvl0.h parilvl1.h > pariinl.h
/usr/bin/gcc -c -O3 -Wall -fno-strict-aliasing -fomit-frame-pointer -I. -I../src/headers -I../src/language -o gp.o ../src/gp/gp.c
cd ../src/desc && /usr/bin/perl merge_822 ../functions/*/* > def-linux-x86_64-25767.tmp
mv ../src/desc/def-linux-x86_64-25767.tmp ../src/desc/pari.desc
cd ../src/desc && /usr/bin/perl gen_proto gp pari.desc > gp_init-linux-x86_64-25767.tmp
mv ../src/desc/gp_init-linux-x86_64-25767.tmp ../src/gp/gp_init.h
/usr/bin/gcc -c -O3 -Wall -fno-strict-aliasing -fomit-frame-pointer -I. -I../src/headers -I../src/graph -o gp_init.o ../src/gp/gp_init.c
/usr/bin/gcc -c -O3 -Wall -fno-strict-aliasing -fomit-frame-pointer -I. -I../src/headers -I../src/language -o gp_rl.o ../src/gp/gp_rl.c
cd ../src/desc && /usr/bin/perl gen_proto highlevel pari.desc > highlvl-linux-x86_64-25767.tmp
mv ../src/desc/highlvl-linux-x86_64-25767.tmp ../src/gp/highlvl.h
/usr/bin/gcc -c -O3 -Wall -fno-strict-aliasing -fomit-frame-pointer -I. -I../src/headers -DDL_DFLT_NAME=NULL -o highlvl.o ../src/gp/highlvl.c
/usr/bin/gcc -c -O3 -Wall -fno-strict-aliasing -fomit-frame-pointer -I. -I../src/headers -o whatnow.o ../src/gp/whatnow.c
/usr/bin/gcc -c -O3 -Wall -fno-strict-aliasing -fomit-frame-pointer -I. -I../src/headers -I../src/graph -o plotport.o ../src/graph/plotport.c
/usr/bin/gcc -c -O3 -Wall -fno-strict-aliasing -fomit-frame-pointer -I. -I../src/headers -o plotnull.o ../src/graph/plotnull.c
cat ../src/kernel/none/mp.c ../src/kernel/none/cmp.c ../src/kernel/none/gcdll.c ../src/kernel/none/ratlift.c ../src/kernel/none/invmod.c ../src/kernel/none/gcd.c ../src/kernel/none/mp_indep.c ../src/kernel/none/add.c > mp.c
/usr/bin/gcc -c -O3 -Wall -fno-strict-aliasing -fomit-frame-pointer -fPIC -I. -I../src/headers -o mp.o mp.c
/usr/bin/gcc -c -O3 -Wall -fno-strict-aliasing -fomit-frame-pointer -I. -I../src/headers -fPIC -o mpinl.o ../src/kernel/none/mpinl.c
/usr/bin/gcc -c -O3 -Wall -fno-strict-aliasing -fomit-frame-pointer -I. -I../src/headers -fPIC -o Flx.o ../src/basemath/Flx.c
/usr/bin/gcc -c -O3 -Wall -fno-strict-aliasing -fomit-frame-pointer -I. -I../src/headers -fPIC -o Qfb.o ../src/basemath/Qfb.c
/usr/bin/gcc -c -O3 -Wall -fno-strict-aliasing -fomit-frame-pointer -I. -I../src/headers -fPIC -o RgX.o ../src/basemath/RgX.c
/usr/bin/gcc -c -O3 -Wall -fno-strict-aliasing -fomit-frame-pointer -I. -I../src/headers -fPIC -o alglin1.o ../src/basemath/alglin1.c
cc1: out of memory allocating 488 bytes after a total of 3329134592 bytes
make[2]: *** [base3.o] Error 1
make[2]: Leaving directory `/root/Download/pari-2.3.5/Olinux-x86_64'
make[1]: *** [gp] Error 2
make[1]: Leaving directory `/root/Download/pari-2.3.5'
make: *** [all] Error 2

2007fld · 10-01-2010, 10:44 PM

Here is free -m output:

Quote:

linux-7huw:~ # free -m
total used free shared buffers cached
Mem: 1998 102 1895 0 0 51
-/+ buffers/cache: 50 1948
Swap: 2055 33 2021