Good thought, but have checked out ~/.config/Thunar and could not find the new feature I seek there. I doubt that it is a user configurable feature with a handy boolean that can be flipped.
The reason I think a Thunar programming bug has crept in is that I am now seeing the names of fields ('ReplaceDialoguePart1|', 'ReplaceDialoguePart2|') in dialogue boxes as well as the contents of those fields. These are what I seek in the source code but have not yet found. Somebody probably removed or inserted a comma to generate this innocuous bug.
While the ReplaceDialogue box is on the screen, it doesn't matter if you mouse over the 'FileOperations' box or not, the flashing persists. I suspect this is a GTK response to a Thunar call. If I find the lost or added comma (or whatever), I'll be close to my issue, I think.
I keep reading through
https://bazaar.launchpad.net/~vcs-im.../head:/thunar/ in the hope that I can find it, but whether my programming skill is up to making a correction is another matter.
The good thing is that nobody else seems to have this issue.
Maybe I'll switch to another file manager while I find the bug. I had a fit earlier today, while reading a web page (different workspace), without realising this blinking, up on the panel, had caused it, until after the event. It must have been going on for a long time before I blacked out.