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You can configure doxygen to extract the code structure from undocumented source files. This is very useful to quickly find your way in large source distributions. You can also visualize the relations between the various elements by means of include dependency graphs, inheritance diagrams, and collaboration diagrams, which are all generated automatically.
I tried it just for projects that used it also as for their documentation...
Why don't you use Eclipse for your Development. It makes life a loooooooooooooooooot more easier and programming a muuuuuuuuuuuuuuuuuuch more pleasurable experience!
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