Problem caused with not uninstalling and installing again with changed configuration?
Hello,
I have been installing packages to local directories using “./configure –prefix=” or “perl ./Makefile PREFIX=”. Also, I have been setting the environment variable PERL5LIB. I noticed some messages that made me think that I was setting the “prefix” and PERL5LIB directories wrong.
An example of one those messages involving the “PERL5LIB”:
could not find ParserDetails.ini in /home/nmsutton/Local_Installations/lib/perl5/site_perl//5.8.8/XML/SAX
Example of one of those messages involving the “prefix”:
Appending installation info to /home/nmsutton/Local_Installations//lib/perl5/5.8.8/i386-linux-thread-multi/perllocal.pod
Notice the double forward (//) slashes above. Those slashes looked like they were the problem. I specified directory paths for “PERL5LIB” and “prefix” without a forward slash (/) at the end of the directory paths. That seems to cause the unusual/error messages including double forward slashes to go away.
Also, I had a similar situation with specifying directories for a package named expat for a package named XML-Parser.
What I did was I installed packages using the PERL5LIB and PREFIX directory settings that appeared to be wrong. Then, without uninstalling those packages I corrected the PERL5LIB and PREFIX directory settings and installed the packages again. The question I have is have I created a problem by installing then not uninstalling those packages but instead installing again the packages with the settings changes described above? Should I have uninstalled the packages before reinstalling them? Would not uninstalling them have created a problem? This work is for genetics research I am involved in so I am really trying to make sure that things are working.
Thanks,
Nate
P. S.
The packages that the above situation occurred to are:
ExtUtils-MakeMaker-6.56, Compress-Raw-Zlib-2.030, Compress-Raw-Bzip2-2.031, IO::Compress (A Perl module), Html::Tagset (Perl module), libwww-perl-5.837, expat-2.0.1, XML-Parser-2.36, XML-Grove-0.46alpha, XML-NamespaceSupport-1.11, XML-SAX
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