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Old 01-24-2015, 02:13 AM   #1
TASI TSUNG YU
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Question How to install and run on Centos by system Crystallography & NMR System


Originally can successfully run cns on Ubuntu,but after a change to Centos the csh command can not be executed.

What is wrong command or installation error can not be used? Thanks in advance.
 
Old 01-24-2015, 04:35 AM   #2
unSpawn
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If you are missing Csh:
Code:
 ~]$ ls -al /bin/csh
/bin/ls: cannot access "/bin/csh": No such file or directory
then install the package:
Code:
yum -y install csh
 
Old 01-24-2015, 10:55 AM   #3
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Looking at the other thread, http://www.linuxquestions.org/questi...em-4175531984/ , apparently the OP is trying to run a specialist piece of scientific software. It is not my field, but I do recognise the terms. http://www.ncbi.nlm.nih.gov/pubmed/9757107
The software instructions seem to be here. http://www.msg.ucsf.edu/local/progra...ion/frame.html
 
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Old 01-25-2015, 08:37 PM   #4
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Quote:
Originally Posted by unSpawn View Post
If you are missing Csh:
Code:
 ~]$ ls -al /bin/csh
/bin/ls: cannot access "/bin/csh": No such file or directory
then install the package:
Code:
yum -y install csh
I will try, thank you very much
 
Old 01-25-2015, 08:40 PM   #5
TASI TSUNG YU
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Quote:
Originally Posted by allend View Post
Looking at the other thread, http://www.linuxquestions.org/questi...em-4175531984/ , apparently the OP is trying to run a specialist piece of scientific software. It is not my field, but I do recognise the terms. http://www.ncbi.nlm.nih.gov/pubmed/9757107
The software instructions seem to be here. http://www.msg.ucsf.edu/local/progra...ion/frame.html


I have read this page, but too much inside information, I do not know what i need
 
Old 01-25-2015, 09:33 PM   #6
knudfl
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CentOS :

There is no package 'csh' available for CentOS

/bin/csh is provided by the package tcsh :
# yum install tcsh
 
Old 01-26-2015, 02:30 AM   #7
TASI TSUNG YU
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csh problem has been solved, the instructions: csh -f

but I later re-install the cns in CentOS, the system displays:[environmental variable $CNS_SOLVE has been defined incorrectly]

Can someone teach me what is this meant?
 
Old 01-26-2015, 03:31 AM   #8
unSpawn
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Quote:
Originally Posted by TASI TSUNG YU View Post
but I later re-install the cns in CentOS, the system displays:[environmental variable $CNS_SOLVE has been defined incorrectly]
In the http://www.msg.ucsf.edu/local/progra...ion/frame.html link allend posted, under the "Binary installation on Intel i686 and x86_64 architectures running Linux" header it literally reads:
Quote:
- edit the file cns_solve_env - change the line: setenv CNS_SOLVE 'location of CNSsolve directory'
- before using CNSsolve: source cns_solve_env
So please actually read the documentation and follow the instructions.
 
Old 01-26-2015, 05:55 AM   #9
TASI TSUNG YU
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Question

Quote:
Originally Posted by unSpawn View Post
In the http://www.msg.ucsf.edu/local/progra...ion/frame.html link allend posted, under the "Binary installation on Intel i686 and x86_64 architectures running Linux" header it literally reads:

So please actually read the documentation and follow the instructions.

Files which referred [CHANGE THE NEXT LINE TO POINT TO THE LOCATION OF THE CNSsolve DIRECTORY][setenv CNS_SOLVE _CNSsolve_location_]

Will I need to change the path, or the need to change the settings file inside?
 
  


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