Quote:
I've put 'top' on with an interval of .1, and there isn't a particular program hitting the top of this list when it happens.
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If that's the case, I would suspect you are hanging on hard disk access for some reason. Post your hardware and in particular how your hard drives are configured eg PATA, SATA, Raid, etc. I experienced similar problems in the past with PATA hard drives connected to a PCI IDE controller card. I assume you have adequate ram and are not going into swap.