perl error in using DBD::mysql
Hello all , i amworking on orthomcl software which requirs mysql , when i give the command
[cdac@nbri bin]$ orthomclLoadBlast my_orthomcl/orthomcl.configmy_orthomcl/similarSequence.txt it gives Can't load '/usr/lib64/perl5/vendor_perl/5.8.8/x86_64-linux-thread-multi/auto/DBD/mysql/mysql.so' for module DBD::mysql: libmysqlclient.so.15: cannot open shared object file: No such file or directory at /usr/lib64/perl5/5.8.8/x86_64-linux-thread-multi/DynaLoader.pm line 230, <F> line 5. at /storage/home/cdac/OrthoMCL/orthomclSoftware-v2.0.8/bin/../lib/perl/OrthoMCLEngine/Main/Base.pm line 48 Compilation failed in require at /storage/home/cdac/OrthoMCL/orthomclSoftware-v2.0.8/bin/../lib/perl/OrthoMCLEngine/Main/Base.pm line 48, <F> line 5. mysql.so file is present then why it is giving this error??and how to solve this ? |
Does perl exists in Your system?
Which distro do You use? perl -v paste it here regards |
[cdac@nbri ~]$ perl -v
This is perl, v5.8.8 built for x86_64-linux-thread-multi Copyright 1987-2006, Larry Wall Perl may be copied only under the terms of either the Artistic License or the GNU General Public License, which may be found in the Perl 5 source kit. Complete documentation for Perl, including FAQ lists, should be found on this system using "man perl" or "perldoc perl". If you have access to the Internet, point your browser at http://www.perl.org/, the Perl Home Page. |
What disibution are u using?
Meybe there are missing perl-mysql modules in your system? Thats a shot, im not an expert. And in addition my english isnt that good. Sorry then. regards D.W |
does this file exist? '/usr/lib64/perl5/vendor_perl/5.8.8/x86_64-linux-thread-multi/auto/DBD/mysql/mysql.so'. Yes, you may need to install a few perl modules
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Go to CPAN.org, download the package and install it: http://search.cpan.org/~capttofu/DBD-mysql-4.023/ |
yes.. /usr/lib64/perl5/vendor_perl/5.8.8/x86_64-linux-thread-multi/auto/DBD/mysql/mysql.so file is there but it is unable to load @ pan64
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file '/usr/lib64/perl5/vendor_perl/5.8.8/x86_64-linux-thread-multi/auto/DBD/mysql/mysql.so'
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which modules i need to install in my machine to run it properly ?? (mysql is already installed)
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