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Booting up to Windows or Debian isn't a problem, so long as the external drive is plugged in.
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That would be the behavior one would expect if when installing Debian on the external drive, you installed part of the Grub bootloader to the master boot record of the internal drive, the one with vista.
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I want to be able to boot into Debian when it is connected
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Install Debian Grub to the mbr of the external rather than the internal drive.
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I want to be able to boot into Windows when the external drive is not connected
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You will need to get windows bootloader on the master boot record of the internal drive. AFAIK, the files needed to do this are not available on a vista Recovery disk. You usually need a full installation CD/DVD but you could try the link below, review the instructions and click on the link below Option 2, the link for neosmart. You should be able to download an iso there to burn to disk to use. Instructions are on the site below:
http://www.bleepingcomputer.com/forums/topic347632.html