The /etc/rc.local is the last things executed on system boot (before the login prompt appears). Are you putting actual iptables commands in here? If so they should work. You can put a few echo statemnts in there to be sure that the file is being parsed. Also, /etc/rc.local should be a symlink to /etc/rc.d/init.d/rc.local (on RH based systems like FC3 at least).
Why not just use the existing FC firewall script, though?
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