Thanks for the reply. Actually, I got it and it had nothing to do with the jumpers.

I found that I had to boot and load the kernel from the cdrom, do the
mkraid /dev/md0 thing, then once everything was synched, reboot as normal and do a
raidstart /dev/md0 I also edited lilo.conf to look for md0 as the boot disk and changed hda1 to type fd in fdisk. Works perfectly now! The dang HOWTO didn't quite get into all of that.