fdisk merely plays with partition definitions - not contents. It doesn't "format" anything.
But you may not be asking what you think you're asking.
I presume by "The only thing I have changed about hda1 is the boot element" you mean the boot flag (the aster in the list above) ???.
It gets ignored by Linux - do as you please.
To save a remote re-boot, try
That may save you any angst.