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For transfering files over the serial port there are terminal utilities called rx,rb,rz to receive files via xmodem, ymodem and zmodem protocols that can be used on the embedded side. You will have to search to see if your system has them. On the fedora side you would use a terminal program like minicom which can transfer files via any of the mentioned protocols.
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Copying file from Fedora 9 to Linux embedded ?
