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Have you altered your HOOKS in /etc/mkinitcpio.conf?
cat /etc/mkinitcpio.conf |grep HOOKS
Originally Posted by https://wiki.archlinux.org/index.php/Installing_Arch_Linux_on_a_USB_key
Before creating the initial RAM disk # mkinitcpio -p linux, in /etc/mkinitcpio.conf add the usb hook to the hooks array right after udev. This is necessary for appropriate module loading in early userspace.