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I have FreeNX (0.3.1-3) on Suse 9.3 and NX Client for Windows (1.5.0_103) on W2K. I can run everything as if I were at the actual machine except for GnuCash (1.8.9-8), which starts to load, but then never opens. The splash window just disappears.
As a guess, I tried the following (but it did not change the result):
1. Suse box: Enable xfs and open port 7100
2. Firewall: Open port 7100
3. NX Client: Check 'Use font server' with my [susehostname.org] and port 7100.