[SOLVED] Invalid character in name at (1) /usr/include/stdc-predef.h:2.3: Included at c_po

Sefid par · 05-11-2015, 03:10 AM

I want to install Octopus 4.1.2; I got this error while 'make'
What would be the problem. Would you mind help my by explaining the problem?
Or help me find out How to solve?
Thanks

Code:

gfortran -pipe -O3 -funroll-loops -ffast-math -ffree-line-length-none      -I /opt/etsf/include -I ../../src/basic -I ../../src/math -I ../../src/species -I ../../src/ions -I ../../src/grid -I ../../src/poisson -I ../../src/states -I ../../src/xc -I ../../src/system -I ../../src/hamiltonian -I ../../src/scf -I ../../src/td -I ../../src/opt_control -I ../../src/sternheimer -I ../../external_libs/qshep -I ../../external_libs/bpdn   -c  -o c_pointer.o c_pointer_oct.f90
/usr/include/stdc-predef.h:1.1:
    Included at c_pointer.F90:1:

/* Copyright (C) 1991-2015 Free Software Foundation, Inc.
 1
Error: Invalid character in name at (1)
/usr/include/stdc-predef.h:2.3:
    Included at c_pointer.F90:1:

   This file is part of the GNU C Library.
   1
Error: Unclassifiable statement at (1)
/usr/include/stdc-predef.h:4.3:
    Included at c_pointer.F90:1:

   The GNU C Library is free software; you can redistribute it and/or
   1
Error: Unclassifiable statement at (1)
/usr/include/stdc-predef.h:4.39:
    Included at c_pointer.F90:1:

   The GNU C Library is free software; you can redistribute it and/or
                                       1
Error: Unclassifiable statement at (1)
/usr/include/stdc-predef.h:5.3:
    Included at c_pointer.F90:1:

   modify it under the terms of the GNU Lesser General Public
   1
Error: Unclassifiable statement at (1)
/usr/include/stdc-predef.h:6.3:
    Included at c_pointer.F90:1:

   License as published by the Free Software Foundation; either
   1
Error: Unclassifiable statement at (1)
/usr/include/stdc-predef.h:6.57:
    Included at c_pointer.F90:1:

   License as published by the Free Software Foundation; either
                                                         1
Error: Unclassifiable statement at (1)
/usr/include/stdc-predef.h:7.3:
    Included at c_pointer.F90:1:

   version 2.1 of the License, or (at your option) any later version.
   1
Error: Unclassifiable statement at (1)
/usr/include/stdc-predef.h:9.3:
    Included at c_pointer.F90:1:

   The GNU C Library is distributed in the hope that it will be useful,
   1
Error: Unclassifiable statement at (1)
/usr/include/stdc-predef.h:10.3:
    Included at c_pointer.F90:1:

   but WITHOUT ANY WARRANTY; without even the implied warranty of
   1
Error: Unclassifiable statement at (1)
/usr/include/stdc-predef.h:10.29:
    Included at c_pointer.F90:1:

   but WITHOUT ANY WARRANTY; without even the implied warranty of
                             1
Error: Unclassifiable statement at (1)
/usr/include/stdc-predef.h:11.3:
    Included at c_pointer.F90:1:

   MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
   1
Error: Unclassifiable statement at (1)
/usr/include/stdc-predef.h:12.3:
    Included at c_pointer.F90:1:

   Lesser General Public License for more details.
   1
Error: Unclassifiable statement at (1)
/usr/include/stdc-predef.h:14.3:
    Included at c_pointer.F90:1:

   You should have received a copy of the GNU Lesser General Public
   1
Error: Unclassifiable statement at (1)
/usr/include/stdc-predef.h:15.3:
    Included at c_pointer.F90:1:

   License along with the GNU C Library; if not, see
   1
Error: Unclassifiable statement at (1)
/usr/include/stdc-predef.h:15.41:
    Included at c_pointer.F90:1:

   License along with the GNU C Library; if not, see
                                         1
Error: Unclassifiable statement at (1)
/usr/include/stdc-predef.h:16.4:
    Included at c_pointer.F90:1:

   <http://www.gnu.org/licenses/>.  */
    1
Error: Invalid character in name at (1)
/usr/include/stdc-predef.h:21.1:
    Included at c_pointer.F90:1:

/* This header is separate from features.h so that the compiler can
 1
Error: Invalid character in name at (1)
/usr/include/stdc-predef.h:22.3:
    Included at c_pointer.F90:1:

   include it implicitly at the start of every compilation.  It must
   1
Error: Unclassifiable statement at (1)
/usr/include/stdc-predef.h:23.3:
    Included at c_pointer.F90:1:

   not itself include <features.h> or any other header that includes
   1
Error: Unclassifiable statement at (1)
/usr/include/stdc-predef.h:24.4:
    Included at c_pointer.F90:1:

   <features.h> because the implicit include comes before any feature
    1
Error: Invalid character in name at (1)
/usr/include/stdc-predef.h:25.3:
    Included at c_pointer.F90:1:

   test macros that may be defined in a source file before it first
   1
Error: Unclassifiable statement at (1)
/usr/include/stdc-predef.h:26.3:
    Included at c_pointer.F90:1:

   explicitly includes a system header.  GCC knows the name of this
   1
Error: Unclassifiable statement at (1)
/usr/include/stdc-predef.h:27.3:
    Included at c_pointer.F90:1:

   header in order to preinclude it.  */
   1
Error: Unclassifiable statement at (1)
/usr/include/stdc-predef.h:29.1:
    Included at c_pointer.F90:1:

/* glibc's intent is to support the IEC 559 math functionality, real
 1
Error: Invalid character in name at (1)
Fatal Error: Error count reached limit of 25.
make[3]: *** [c_pointer.o] Error 1
make[3]: Leaving directory `/home/evolution/Downloads/Package/octopus-4.1.2/src/basic'
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory `/home/evolution/Downloads/Package/octopus-4.1.2/src'
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory `/home/evolution/Downloads/Package/octopus-4.1.2'
make: *** [all] Error 2

knudfl · 05-11-2015, 05:08 AM

The "/usr/include/stdc-predef.h" errors :

The problem is that for every line, every F90 action, the file '/usr/include/stdc-predef.h' is read.
( Probably an octopus bug ?)
And the {octopus code / gfortran} reads the style C commented ( /*) text as code.

A workaround : First, save a copy of stdc-predef.h .
Then delete all the "text information". Like the attached stdc-predef.h .
(You cannot just add a fortran comment ( A ! ) because for every second action gcc is used.
And will read stdc-predef.h, and choke in the !`s ).
-

knudfl · 05-11-2015, 08:10 AM

OK, the "octopus-4.1.2.tar.gz" is buggy.
But 4.1.x has been continuously updated.
You can get the bug fixed version with :
$ svn co http://www.tddft.org/svn/octopus/branches/4.1.x
$ cd 4.1.x/
$ svn update

Building the application : ( $ cd 4.1.x/ )
$ aclocal-1.8 && autoheader && automake-1.8 --add-missing && autoreconf -i
'configure' example : $ export CC=gcc44 CXX=g++44 && ./configure
$ make : No issues.

About gcc / g++ : I tried with version 4.9.2 : Didn't work.
Hence the "export CC=gcc44 CXX=g++44" ( For version 4.4.7 ).
* Ubuntu : export CC=gcc-4.4 CXX=g++-4.4 && ./configure

-

cndaqiang · 05-07-2019, 11:29 AM

According to "https://cndaqiang.github.io/2018/09/18/centos7-octopus-4.1.2/"
After

Code:

./configure

You can run the script below

Code:

#!/bin/bash
for i in basic  math   species   ions   grid   poisson   states   xc   hamiltonian   system   scf   td   opt_control   td   sternheimer   main
do
Makefile=src/${i}/Makefile
#.F90.o
hang=$(grep -n "^.F90.o:"  $Makefile | awk '{printf "%d\n",$1}' )
hang=$(echo -e "$hang+4"|bc)
sed -i "${hang}i CNQsed -i '5,41d' \$\*_oct.f90" $Makefile
sed -i "${hang}s/CNQ/\t/g" $Makefile
#.F90_oct.f90
hang=$(grep -n .F90_oct.f90 $Makefile | awk '{printf "%d\n",$1}' )
hang=$(echo -e "$hang+4"|bc)
sed -i "${hang}i CNQsed -i '5,41d' \$\*_oct.f90" $Makefile
sed -i "${hang}s/CNQ/\t/g" $Makefile

done

then

Code:

make