running a shell script which invokes another shell program!!!
Hi to all,
i hav a program called DaliLite to be run on 6o proteins....... the syntax s Dalilite -pairwise pdb1 pdb2 so hav to generate a script for runnin Dalilite foe all 60 vs 60 entries..... I knw i hav to tak the contents of my input file to an array and then finally say $i $j........but i need $j > $i only to be run..... for eq. DAlilite -pairwise pdb5 pdb55 etc. i don want pdb5 pdb5 or pdb5 pdb3 etc..... KIndly help this out........ |
Something like 'for ((i=1;i<55;i++)); do Dalilite -pairwise pdb$i pdb$[$i+1]; done'?
[EDIT]Soz. Posted too soon. Needs something wrapped around that. Maybe something like 'for ((i=1;i<61;i++)); do for ((n=1;n<61;n++)); do [ $i -ne $n -a $i -le $n ] && Dalilite -pairwise pdb$i pdb$n; done; done'?[/EDIT] |
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