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I have Intel assembly code running on Windows assembled with MASM 6.11. I would like to port it over to Redhat Linux. I've tried NASM and it just doesn't have the compatibility that I need. Is this my only option?
You could try YASM. It is a complete rewrite of NASM with support for the x86_64 instruction set and more exciting new features. Of course, you might want to post the specific problems you are having with NASM and someone may be able to help you.