Hi,
It sounds like the best option would be to migrate your data from the MySQL 3 database to the MySQL 5 one. I am not sure if both apps support version 5.
On the other hand, you probably can't run both at the same time since they are trying to open the same TCP port or socket file. If you reconfigure one to listen on a different port (or a different IP address if the server is multi-homed) you may be able to run them at the same time.
Regards,
Jim
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