In general, .bin files are scripts to be run (although they may be exectuables as well). In either case, you need to tell the OS (okay, the file system) that they are executable by setting the "executable" flag on the file. This is done with the "chmod" command.
Usually, you want to do something like :
chmod +x filename
However, if you want only YOU to be able to run it, use:
chmod u+x filename