You could modify source files for all commands that touch cron files then recompile which would be quite an undertaking. You'd also have to remember to re-edit every time upstream commands were updated and applied.
Were it me I'd simply make a symbolic link instead.
Alternatively you could use the remount option of mount command:
Quote:
Since Linux 2.4.0 it is possible to remount part of the file hierarchy
somewhere else. The call is
mount --bind olddir newdir
After this call the same contents is accessible in two places. One can
also remount a single file (on a single file)
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