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To add more information:
The reason you've got 2 directories like that is that they were probably created by different users (1000 is a user ID) or different distros sharing a partition.
Thanks for all your replies. Are these folders created only when I delete a file, or these fiels are generated by default when something is mounted.
They are created during install or adding a new user. The only thing you really need to bother with is purging the files out every once in awhile, or setting a kb limit to the folder.
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