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I've never used that particular program, but from the website it sounds like you might have to do a little bit of configuration before you dive in. Check this out, it may get you rolling: http://mldonkey.sourceforge.net/FAQs
Well unfortunately I can't help you much further with that program. You can get a Linux version of Limewire here http://limewire2009.get-access.net/?tid=w1. It requires Java, and it may be easier for you to try finding it in some Debian repository somewhere (give google a try!). Maybe Limewire will help satisfy your P2P needs until you figure things out a little better with ML Donkey. Good luck!