I dont even remember if they do. I just added there to be on the safe side since the PATA drives do have it. If it doesnt have jumpers, then ignore step #3.
As for the rest now, you got some good tips on how to go already.
You should read man page for fdisk or you can check, this is a great guide:
And then all you need to do is to create your fstab, so the drives will be mounted at boot time. You can also read the man page for fstab or again:
This is mine:
/dev/sda2 /boot ext2 noauto,noatime 1 2
/dev/sda1 / auto noatime 0 1
/dev/sda4 none swap sw 0 0
/dev/sda3 /home ext3 noatime 0 1
/dev/cdrom /mnt/cdrom auto noauto,user 0 0
shm /dev/shm tmpfs nodev,nosuid,noexec 0 0
proc /proc proc nodev,nosuid,noexec 0 0