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If you don't install with the package manager, all you can do is track down the files and delete them. Hopefully they will all have names that include the name of the program.
If you delete files and directories from a terminal, there is no way to restore in the normal GUI sense (eg trashcan). You would have to use a file recovery utility like Testdisk. The files would only be recoverable if nothing else had been written to the relevant portions of the drive.
But note that make uninstall only works if you don't make clean first.
Robin
make uninstall works only if it is supported in makefile. Many programs don't support "make uninstall". So making software package (and then installing package) instead of directly installing from source was a better idea.
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