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If you want to delete all files from user X, but not those in user X's home directory (say /home/X) find is probably the tool to use.
find / -user X | grep -v "/home/X"
The above command will look for files belonging to user X (-user X), the grep -v part will exclude the home dir of X.
If this is to your liking add the following to actually remove the files that are found: | xargs rm
The complete command will look like this:
find / -user X | grep -v "/home/X" | xargs rm
Hope this helps.
@vinaytp: Your solution will remove all files from the specific user, including those in the homedir!!!