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You haven't told anyone what distro you're using so I can't really say. Use your package manager (aptitude, yum or something else) and download the latest package. How do you update your machine in general?
jdk
i - the package is installed and all its dependencies are satisfied.
c - the package was removed, but its configuration files are still present.
p - the package and all its configuration files were removed, or the package was never installed.
v - the package is virtual.
B - the package has broken dependencies.
u - the package has been unpacked but not configured.
C - half-configured: the package's configuration was interrupted.
H - half-installed: the package's installation was interrupted.
As you can see, the v-flag stands for "virtual".
Yes, /usr/local/bin is the normal location for things you have compiled yourself. It should be safe to remove it.
jdk
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