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Old 06-08-2011, 04:04 AM   #1
yimaizhe
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A question about python


Hi,Everyone,
I am using ubuntu 10.10 and the python installed by "command:sudo apt-get install python" is python2.6.6
And I am intended to run a software compile by python2.6.6 from 2 egg files.

what is the matter when occurring this type of error ?
Thanks.


p8h61@p8h61-System-Product-Name:~/pipeline$ ./birdsuite_converter --familyfile /home/p8h61/TEST/Output.fam --plateroot /home/p8h61/TEST/plates --metadir /home/p8h61/TEST/installed_metadata --outputdir ~/output --celmap /home/p8h61/TEST/Output.celMap --ignorefam
=========================================================
= BIRDSUITE FORMAT CONVERTER =
=========================================================

FAWKES->GVAR:
Looking SNP map: genomewidesnp_6.rs_snp_map
Traceback (most recent call last):
File "./birdsuite_converter", line 9, in <module>
load_entry_point('plinkpipeline==1.6.6', 'console_scripts', 'birdsuite_converter')()
File "/usr/local/lib/python2.6/dist-packages/plinkpipeline-1.6.6-py2.5.egg/plink_pipeline/birdsuite_to_plink.py", line 125, in main
fawkes_to_gvar.main(current_args)
File "/usr/local/lib/python2.6/dist-packages/plinkpipeline-1.6.6-py2.5.egg/plink_pipeline/fawkes_to_gvar.py", line 83, in main
if len(map_files > 0):
TypeError: object of type 'bool' has no len()
 
Old 06-08-2011, 04:06 AM   #2
acid_kewpie
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well it looks like exactly what the error says, you can't get the length of a boolean value. How long is "True" ??? it makes no sense. presumably the code is supposed to read "if len(map_files) > 0:"
 
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Old 06-09-2011, 10:20 AM   #3
yimaizhe
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Quote:
Originally Posted by acid_kewpie View Post
well it looks like exactly what the error says, you can't get the length of a boolean value. How long is "True" ??? it makes no sense. presumably the code is supposed to read "if len(map_files) > 0:"
Thanks a lot for your answer,but how can I make it work ?what should I do to resolve it ?
 
Old 06-09-2011, 10:31 AM   #4
acid_kewpie
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I already told you... ?? change that line...
 
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Old 06-12-2011, 08:03 PM   #5
yimaizhe
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Quote:
Originally Posted by acid_kewpie View Post
I already told you... ?? change that line...

Thanks very much ,whereas I am a total newbie on ubuntu ,and I really do not know how to change it .
could you please show me an example ?
 
Old 06-13-2011, 02:48 AM   #6
acid_kewpie
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Are you joking?? I already did.
 
Old 06-20-2011, 09:43 AM   #7
yimaizhe
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Quote:
Originally Posted by acid_kewpie View Post
Are you joking?? I already did.

Sorry ,I gotta it.
Thanks a lot.
 
  


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