Ok, I have completely soaked in the concept of chown and chmod and how to use them. With my newfound knowledge I have the same problem. But now I can go into more detail.
When I connect to the internet I have to run Network Configuration, this asks for a root password. The program that runs it is called "neat". I went and ran "ls -l neat" and come to find it has "lrwxrwxrwx root root" linking to consolehelper. I've tried changing it to "root.Bigun", but it still asks for root password. Ideas?