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You build gentoo according to the hardware specifications, not to the assembler's specification.
Build the amd64/x86_64.
Don't install a display manager.
Build X after you install a base system.
Add the desktop gui later, then the sound , then graphics drivers and what not.
This is the way I build Debian, NetBSD, FreeBSD, and whatever else I am using.
Slackware has 64bit support now. You shouldn't need x86 for anything on Linux, there's ia32 compat and libs you can install.
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