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Old 12-26-2007, 05:04 PM   #1
sonichedgehog
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Registered: Oct 2007
Location: London UK
Distribution: Fedora Core 17
Posts: 298

Rep: Reputation: 32
Intermittent boot problem on 4.0- impossibly slow


I have P3 500 256 ram 1999, Etch 4.0 but upgraded via sources.list to lenny. Since 1st upgrade the 1st boot of the day has resulted in 90-100% processor use on Gnome Desktop, other apps impossibly slow, also noticed reading HD is very slow compared to normal- the indicator light is seldom on. This first boot takes 10min to login then 5min to gnome and sometimes the taskbars are missing.

However restart or hitting the reset button without turning off results in a normal system within 5min then 1min, processor @ 10-15% on Gnome, all taskbars present and faultless operation.

I have run dmesg both on normal and defective boot and attach the result of the successful boot below, so this is a long post and I apologize for that, even after reducing the size to comply with LQ requirement. Unsuccessful boot info is removed from the post for this reason.

Having compared the results as best I can, there are some differences in order of operations but the significant differences appear to be

"EXT3-fs: INFO: recovery required on readonly filesystem.

EXT3-fs: write access will be enabled during recovery.
"
about 80% of the way through the file, and another 8 lines or so of "SDA" messages immediately preceding.

The file contains my annotations <#....>.

If any of you have the time to look through this lot and see whether there are any clues to what is happening, I will be very grateful. Thank you!


ON A SUCCESSFUL STARTUP BY HITTING THE RESET BUTTON:

Linux version 2.6.22-3-686 (Debian 2.6.22-6) (maks@debian.org) (gcc version 4.1.3 20071019 (prerelease) (Debian 4.1.2-17)) #1 SMP Mon Nov 12 08:32:57 UTC 2007

BIOS-provided physical RAM map:

BIOS-e820: 0000000000000000 - 000000000009fc00 (usable)

BIOS-e820: 000000000009fc00 - 00000000000a0000 (reserved)

BIOS-e820: 00000000000e0000 - 0000000000100000 (reserved)

BIOS-e820: 0000000000100000 - 000000000fee0000 (usable)

BIOS-e820: 000000000fee0000 - 000000000fef0000 (ACPI data)

BIOS-e820: 000000000fef0000 - 000000000ff00000 (ACPI NVS)

BIOS-e820: 000000000ff00000 - 0000000010000000 (reserved)

BIOS-e820: 00000000fff80000 - 0000000100000000 (reserved)

0MB HIGHMEM available.

254MB LOWMEM available.

Entering add_active_range(0, 0, 65248) 0 entries of 256 used

Zone PFN ranges:

DMA 0 -> 4096

Normal 4096 -> 65248

HighMem 65248 -> 65248

early_node_map[1] active PFN ranges

0: 0 -> 65248

On node 0 totalpages: 65248

DMA zone: 32 pages used for memmap

DMA zone: 0 pages reserved

DMA zone: 4064 pages, LIFO batch:0

Normal zone: 477 pages used for memmap

Normal zone: 60675 pages, LIFO batch:15

HighMem zone: 0 pages used for memmap

DMI 2.3 present.

ACPI: RSDP 000FA630, 0014 (r0 AMI )

ACPI: RSDT 0FEE0000, 0028 (r1 AMIINT 10 MSFT 97)

ACPI: FACP 0FEE0030, 0074 (r1 AMIINT 10 MSFT 97)

ACPI: DSDT 0FEE00B0, 28C7 (r1 INTEL WHITNEY 1000 MSFT 100000B)

ACPI: FACS 0FEE8000, 0040

ACPI: PM-Timer IO Port: 0x408

Allocating PCI resources starting at 20000000 (gap: 10000000:eff80000)

Built 1 zonelists. Total pages: 64739

Kernel command line: root=/dev/hda1 ro

Local APIC disabled by BIOS -- you can enable it with "lapic"

mapped APIC to ffffd000 (0120b000)

Enabling fast FPU save and restore... done.

Initializing CPU#0

PID hash table entries: 1024 (order: 10, 4096 bytes)

Detected 501.179 MHz processor.

Console: colour VGA+ 80x25

Dentry cache hash table entries: 32768 (order: 5, 131072 bytes)

Inode-cache hash table entries: 16384 (order: 4, 65536 bytes)

Memory: 249488k/260992k available (1687k kernel code, 10944k reserved, 646k data, 244k init, 0k highmem)

virtual kernel memory layout:

fixmap : 0xfff4e000 - 0xfffff000 ( 708 kB)

pkmap : 0xff800000 - 0xffc00000 (4096 kB)

vmalloc : 0xd0800000 - 0xff7fe000 ( 751 MB)

lowmem : 0xc0000000 - 0xcfee0000 ( 254 MB)

.init : 0xc034d000 - 0xc038a000 ( 244 kB)

.data : 0xc02a5f17 - 0xc03477e4 ( 646 kB)

.text : 0xc0100000 - 0xc02a5f17 (1687 kB)

Checking if this processor honours the WP bit even in supervisor mode... Ok.

Calibrating delay using timer specific routine.. 1003.49 BogoMIPS (lpj=2006991)

Security Framework v1.0.0 initialized

SELinux: Disabled at boot.

Capability LSM initialized

Mount-cache hash table entries: 512

CPU: After generic identify, caps: 0183f9ff 00000000 00000000 00000000 00000000 00000000 00000000

CPU: L1 I cache: 16K, L1 D cache: 16K

CPU: L2 cache: 128K

CPU: After all inits, caps: 0183f9ff 00000000 00000000 00000040 00000000 00000000 00000000

Intel machine check architecture supported.

Intel machine check reporting enabled on CPU#0.

Compat vDSO mapped to ffffe000.

Checking 'hlt' instruction... OK.

SMP alternatives: switching to UP code

Freeing SMP alternatives: 11k freed

ACPI: Core revision 20070126

ACPI: setting ELCR to 0800 (from 0e20)

CPU0: Intel Celeron (Mendocino) stepping 05

SMP motherboard not detected.

Local APIC not detected. Using dummy APIC emulation.

Brought up 1 CPUs

Booting paravirtualized kernel on bare hardware

NET: Registered protocol family 16

ACPI: bus type pci registered

PCI: PCI BIOS revision 2.10 entry at 0xfdb21, last bus=1

PCI: Using configuration type 1

Setting up standard PCI resources

ACPI: Interpreter enabled

ACPI: (supports S0 S1 S3 S4 S5)

ACPI: Using PIC for interrupt routing

ACPI: PCI Root Bridge [PCI0] (0000:00)

PCI: Probing PCI hardware (bus 00)

PCI quirk: region 0400-047f claimed by ICH4 ACPI/GPIO/TCO

PCI quirk: region 0480-04bf claimed by ICH4 GPIO

PCI: Transparent bridge - 0000:00:1e.0

ACPI: PCI Interrupt Routing Table [\_SB_.PCI0._PRT]

ACPI: PCI Interrupt Link [LNKA] (IRQs 3 4 5 6 7 *9 10 11 12 14 15)

ACPI: PCI Interrupt Link [LNKB] (IRQs 3 4 5 6 7 9 10 *11 12 14 15)

ACPI: PCI Interrupt Link [LNKC] (IRQs 3 4 *5 6 7 9 10 11 12 14 15)

ACPI: PCI Interrupt Link [LNKD] (IRQs 3 4 5 6 7 9 *10 11 12 14 15)

ACPI: Power Resource [URP1] (off)

ACPI: Power Resource [URP2] (off)

ACPI: Power Resource [FDDP] (off)

ACPI: Power Resource [LPTP] (off)

Linux Plug and Play Support v0.97 (c) Adam Belay

pnp: PnP ACPI init

ACPI: bus type pnp registered

pnp: PnP ACPI: found 13 devices

ACPI: ACPI bus type pnp unregistered

PnPBIOS: Disabled by ACPI PNP

PCI: Using ACPI for IRQ routing

PCI: If a device doesn't work, try "pci=routeirq". If it helps, post a report

NET: Registered protocol family 8

NET: Registered protocol family 20

Time: tsc clocksource has been installed.

PCI: Bridge: 0000:00:1e.0

IO window: a000-afff

MEM window: efd00000-efdfffff

PREFETCH window: e7b00000-e7bfffff

PCI: Setting latency timer of device 0000:00:1e.0 to 64

NET: Registered protocol family 2

IP route cache hash table entries: 2048 (order: 1, 8192 bytes)

TCP established hash table entries: 8192 (order: 4, 98304 bytes)

TCP bind hash table entries: 8192 (order: 4, 65536 bytes)

TCP: Hash tables configured (established 8192 bind 8192)

TCP reno registered

checking if image is initramfs...<6>Switched to high resolution mode on CPU 0

it is

Freeing initrd memory: 5718k freed

audit: initializing netlink socket (disabled)

audit(1198694302.776:1): initialized

VFS: Disk quotas dquot_6.5.1

Dquot-cache hash table entries: 1024 (order 0, 4096 bytes)

io scheduler noop registered

io scheduler anticipatory registered

io scheduler deadline registered

io scheduler cfq registered (default)

Boot video device is 0000:00:01.0

isapnp: Scanning for PnP cards...

isapnp: No Plug & Play device found

Serial: 8250/16550 driver $Revision: 1.90 $ 4 ports, IRQ sharing enabled

serial8250: ttyS0 at I/O 0x3f8 (irq = 4) is a 16550A

serial8250: ttyS1 at I/O 0x2f8 (irq = 3) is a 16550A

00:09: ttyS0 at I/O 0x3f8 (irq = 4) is a 16550A

00:0a: ttyS1 at I/O 0x2f8 (irq = 3) is a 16550A

ACPI: PCI Interrupt Link [LNKB] enabled at IRQ 11

PCI: setting IRQ 11 as level-triggered

ACPI: PCI Interrupt 0000:00:1f.6[B] -> Link [LNKB] -> GSI 11 (level, low) -> IRQ 11

ACPI: PCI interrupt for device 0000:00:1f.6 disabled

RAMDISK driver initialized: 16 RAM disks of 8192K size 1024 blocksize

PNP: PS/2 Controller [PNP030b:PS2K,PNP0f03:PS2M] at 0x60,0x64 irq 1,12

serio: i8042 KBD port at 0x60,0x64 irq 1

serio: i8042 AUX port at 0x60,0x64 irq 12

mice: PS/2 mouse device common for all mice

TCP bic registered

NET: Registered protocol family 1

NET: Registered protocol family 17

Using IPI No-Shortcut mode

Freeing unused kernel memory: 244k freed

input: AT Translated Set 2 keyboard as /class/input/input0

ACPI: CPU0 (power states: C1[C1] C2[C2])

ACPI: Processor [CPU1] (supports 8 throttling states)

Floppy drive(s): fd0 is 1.44M
<#later in unsuccessful boot>
usbcore: registered new interface driver usbfs

usbcore: registered new interface driver hub

usbcore: registered new device driver usb

USB Universal Host Controller Interface driver v3.0

ACPI: PCI Interrupt Link [LNKD] enabled at IRQ 10

PCI: setting IRQ 10 as level-triggered

ACPI: PCI Interrupt 0000:00:1f.2[D] -> Link [LNKD] -> GSI 10 (level, low) -> IRQ 10

PCI: Setting latency timer of device 0000:00:1f.2 to 64

uhci_hcd 0000:00:1f.2: UHCI Host Controller

uhci_hcd 0000:00:1f.2: new USB bus registered, assigned bus number 1

uhci_hcd 0000:00:1f.2: irq 10, io base 0x0000cc00

usb usb1: configuration #1 chosen from 1 choice

hub 1-0:1.0: USB hub found

hub 1-0:1.0: 2 ports detected

ACPI: PCI Interrupt 0000:01:01.0[A] -> Link [LNKB] -> GSI 11 (level, low) -> IRQ 11

uhci_hcd 0000:01:01.0: UHCI Host Controller

uhci_hcd 0000:01:01.0: new USB bus registered, assigned bus number 2

uhci_hcd 0000:01:01.0: irq 11, io base 0x0000a400

usb usb2: configuration #1 chosen from 1 choice

hub 2-0:1.0: USB hub found

hub 2-0:1.0: 2 ports detected

ACPI: PCI Interrupt Link [LNKC] enabled at IRQ 5

PCI: setting IRQ 5 as level-triggered

ACPI: PCI Interrupt 0000:01:01.1[B] -> Link [LNKC] -> GSI 5 (level, low) -> IRQ 5

uhci_hcd 0000:01:01.1: UHCI Host Controller

uhci_hcd 0000:01:01.1: new USB bus registered, assigned bus number 3

uhci_hcd 0000:01:01.1: irq 5, io base 0x0000a800

usb usb3: configuration #1 chosen from 1 choice

hub 3-0:1.0: USB hub found

hub 3-0:1.0: 2 ports detected

usb 1-1: new full speed USB device using uhci_hcd and address 2

usb 1-1: configuration #1 chosen from 1 choice

usb 2-1: new full speed USB device using uhci_hcd and address 2

usb 2-1: configuration #1 chosen from 1 choice

FDC 0 is a post-1991 82077

Uniform Multi-Platform E-IDE driver Revision: 7.00alpha2

ide: Assuming 33MHz system bus speed for PIO modes; override with idebus=xx

ICH: IDE controller at PCI slot 0000:00:1f.1

ICH: chipset revision 2

ICH: not 100% native mode: will probe irqs later

ide0: BM-DMA at 0xffa0-0xffa7, BIOS settings: hdaMA, hdbio

ide1: BM-DMA at 0xffa8-0xffaf, BIOS settings: hdcMA, hddMA

Probing IDE interface ide0...

hda: FUJITSU MPE3173AE, ATA DISK drive

hda: drive side 80-wire cable detection failed, limiting max speed to UDMA33

hda: selected mode 0x42

ide0 at 0x1f0-0x1f7,0x3f6 on irq 14

Probing IDE interface ide1...

hdc: MATSHITADVD-ROM SR-8585, ATAPI CD/DVD-ROM drive

hdd: GENERIC CRD-BP1500P, ATAPI CD/DVD-ROM drive

hdc: selected mode 0x42

hdd: selected mode 0x22

ide1 at 0x170-0x177,0x376 on irq 15

SCSI subsystem initialized

libata version 2.21 loaded.

ACPI: PCI Interrupt 0000:01:01.2[C] -> Link [LNKD] -> GSI 10 (level, low) -> IRQ 10

ehci_hcd 0000:01:01.2: EHCI Host Controller

ehci_hcd 0000:01:01.2: new USB bus registered, assigned bus number 4

ehci_hcd 0000:01:01.2: irq 10, io mem 0xefdffb00

ehci_hcd 0000:01:01.2: USB 2.0 started, EHCI 0.95, driver 10 Dec 2004

usb usb4: configuration #1 chosen from 1 choice

hub 4-0:1.0: USB hub found

hub 4-0:1.0: 4 ports detected

usb 2-1: USB disconnect, address 2
<#THIS EARLIER IN UNSUCCESSFUL & SLIGHT DIFFERENCES, MEMORY STICK ADDED SINCE THEN>

hda: max request size: 128KiB

hda: 33867188 sectors (17340 MB) w/512KiB Cache, CHS=33598/16/63, UDMA(33)

hda: cache flushes not supported

hda: hda1 hda2 < hda5 >

usb 2-1: new full speed USB device using uhci_hcd and address 3

usb 2-1: configuration #1 chosen from 1 choice

Initializing USB Mass Storage driver...

scsi0 : SCSI emulation for USB Mass Storage devices

usbcore: registered new interface driver usb-storage

USB Mass Storage support registered.

usb-storage: device found at 2

usb-storage: waiting for device to settle before scanning

hdc: ATAPI 40X DVD-ROM drive, 512kB Cache, UDMA(33)

Uniform CD-ROM driver Revision: 3.20

usb-storage: device scan complete

scsi 0:0:0:0: Direct-Access USB Flash Drive 1.89 PQ: 0 ANSI: 2

hdd: ATAPI 40X CD-ROM CD-R/RW drive, 2048kB Cache, DMA

Linux Tulip driver version 1.1.15-NAPI (Feb 27, 2007)

ACPI: PCI Interrupt Link [LNKA] enabled at IRQ 9

PCI: setting IRQ 9 as level-triggered

ACPI: PCI Interrupt 0000:01:00.0[A] -> Link [LNKA] -> GSI 9 (level, low) -> IRQ 9

tulip0: MII transceiver #1 config 1000 status 786d advertising 05e1.

eth0: ADMtek Comet rev 17 at Port 0xac00, 00:50:BF:99:A7:F7, IRQ 9.

sd 0:0:0:0: [sda] 64000 512-byte hardware sectors (33 MB)

sd 0:0:0:0: [sda] Write Protect is off

sd 0:0:0:0: [sda] Mode Sense: 03 00 00 00

sd 0:0:0:0: [sda] Assuming drive cache: write through

sd 0:0:0:0: [sda] 64000 512-byte hardware sectors (33 MB)

sd 0:0:0:0: [sda] Write Protect is off

sd 0:0:0:0: [sda] Mode Sense: 03 00 00 00

sd 0:0:0:0: [sda] Assuming drive cache: write through

sda: sda1
<#NOT PRESENT IN UNSUCCESSFUL>

sd 0:0:0:0: [sda] Attached SCSI removable disk

Marking TSC unstable due to: possible TSC halt in C2.

Time: acpi_pm clocksource has been installed.

Attempting manual resume

swsusp: Basic memory bitmaps created

swsusp: Basic memory bitmaps freed

EXT3-fs: INFO: recovery required on readonly filesystem.

EXT3-fs: write access will be enabled during recovery.
<#NOT PRESENT IN UNSUCCESSFUL>
kjournald starting. Commit interval 5 seconds

EXT3-fs: recovery complete.
<#NOT PRESENT IN UNSUCCESSFUL>

EXT3-fs: mounted filesystem with ordered data mode.

pci_hotplug: PCI Hot Plug PCI Core version: 0.5

shpchp: Standard Hot Plug PCI Controller Driver version: 0.4

Intel 82802 RNG detected

iTCO_wdt: Intel TCO WatchDog Timer Driver v1.01 (21-Jan-2007)

iTCO_wdt: failed to reset NO_REBOOT flag, reboot disabled by hardware

iTCO_wdt: No card detected

Real Time Clock Driver v1.12ac

input: PC Speaker as /class/input/input1

Bluetooth: Core ver 2.11

NET: Registered protocol family 31

Bluetooth: HCI device and connection manager initialized

Bluetooth: HCI socket layer initialized

ACPI: PCI Interrupt 0000:00:1f.6[B] -> Link [LNKB] -> GSI 11 (level, low) -> IRQ 11

PCI: Setting latency timer of device 0000:00:1f.6 to 64

Bluetooth: HCI USB driver ver 2.9

usbcore: registered new interface driver hci_usb

ACPI: PCI Interrupt 0000:00:1f.5[B] -> Link [LNKB] -> GSI 11 (level, low) -> IRQ 11

PCI: Setting latency timer of device 0000:00:1f.5 to 64

intel8x0_measure_ac97_clock: measured 54045 usecs

intel8x0: clocking to 48000

parport_pc 00:0b: reported by Plug and Play ACPI

parport0: PC-style at 0x378, irq 7 [PCSPP,TRISTATE,EPP]

Linux agpgart interface v0.102 (c) Dave Jones

agpgart: Detected an Intel i810 Chipset.

agpgart: AGP aperture is 64M @ 0xe8000000

input: ImPS/2 Generic Wheel Mouse as /class/input/input2

Adding 746980k swap on /dev/hda5. Priority:-1 extents:1 across:746980k

EXT3 FS on hda1, internal journal

loop: module loaded

device-mapper: ioctl: 4.11.0-ioctl (2006-10-12) initialised: dm-devel@redhat.com

fuse init (API version 7.8)

eth0: CSR0 01a08000

0000:01:00.0: tulip_stop_rxtx() failed (CSR5 0xfc664010 CSR6 0xff972113)

eth0: Setting full-duplex based on MII#1 link partner capability of 41e1.

input: Power Button (FF) as /class/input/input3

ACPI: Power Button (FF) [PWRF]

input: Power Button (CM) as /class/input/input4

ACPI: Power Button (CM) [PWRB]

lp0: using parport0 (interrupt-driven).

ppdev: user-space parallel port driver

Bluetooth: L2CAP ver 2.8

Bluetooth: L2CAP socket layer initialized

Bluetooth: RFCOMM socket layer initialized

Bluetooth: RFCOMM TTY layer initialized

Bluetooth: RFCOMM ver 1.8

NET: Registered protocol family 10

lo: Disabled Privacy Extensions

eth0: no IPv6 routers present


<END>
 
Old 12-29-2007, 09:04 PM   #2
rch
Member
 
Registered: Feb 2003
Location: Santa Clara,CA
Distribution: Mandriva
Posts: 909

Rep: Reputation: 48
Clearly you have a hard disk problem. Check the SMART status of your hard disk. Check if it is almost at the end of its life.
(Use smartctl to check the SMART status). Here's a link which may help you:
http://www.linuxjournal.com/article/6983
 
Old 12-31-2007, 09:57 AM   #3
sonichedgehog
Member
 
Registered: Oct 2007
Location: London UK
Distribution: Fedora Core 17
Posts: 298

Original Poster
Rep: Reputation: 32
Amazing! Here's the result:
ID# ATTRIBUTE_NAME FLAG VALUE WORST THRESH TYPE UPDATED WHEN_FAILED RAW_VALUE
1 Raw_Read_Error_Rate 0x000b 100 100 032 Pre-fail Always - 31181
2 Throughput_Performance 0x0005 100 100 020 Pre-fail Offline - 0
3 Spin_Up_Time 0x0007 093 090 025 Pre-fail Always - 2
4 Start_Stop_Count 0x0012 097 097 016 Old_age Always - 1561
5 Reallocated_Sector_Ct 0x0033 100 100 024 Pre-fail Always - 0
7 Seek_Error_Rate 0x000b 100 100 020 Pre-fail Always - 3905
8 Seek_Time_Performance 0x0005 100 100 019 Pre-fail Offline - 0
9 Power_On_Seconds 0x0012 051 051 020 Old_age Always - 7436h+30m+56s
10 Spin_Retry_Count 0x0013 100 100 020 Pre-fail Always - 0
12 Power_Cycle_Count 0x0032 090 090 020 Old_age Always - 1559
196 Reallocated_Event_Count 0x0033 100 100 024 Pre-fail Always - 0
197 Current_Pending_Sector 0x0010 100 100 020 Old_age Offline - 0
198 Offline_Uncorrectable 0x0010 100 100 020 Old_age Offline - 0
199 UDMA_CRC_Error_Count 0x000a 200 200 197 Old_age Always - 0
200 Multi_Zone_Error_Rate 0x000b 100 100 020 Pre-fail Always - 1839

Lots of pre-fails - I assume that this is because the HD is worn not just because its old? Anyway, put that together with poor performance @ 100% cpu usage I won't waste any more time with this computer...
Out of interest, what in particular in the dmesg output told you that it was a HD issue? I suspected at first it was an Etch/Lenny Chimaera I'd created, but reading other posts guess that the slow boot was due in part to additional applications, I've corrected that by reverting to Etch & the slow boot is gone but the HD is not working normally (as the indicator light shows) & monitor is at 100%.

Thanks again- you've probably saved me a great deal of time and aggro-Phil
& Happy new year
 
Old 01-02-2008, 02:58 AM   #4
rch
Member
 
Registered: Feb 2003
Location: Santa Clara,CA
Distribution: Mandriva
Posts: 909

Rep: Reputation: 48
You are welcome. I wish you a very happy new year too. You have too many prefails, time to change your hard disk. Since reading hd is i/o, the computer will be very unresponsive if the hd is at the end(or near the end) of its lifespan. I guessed that it was a hd issue as you pointed out, the indicator was showing that there was hard disk issue. Write cache enables faster read/write to your hd. If you still want to use that hd, you may want to disable write cache. That was another reason why I thought it was a hd issue.
 
  


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